R/AllClasses.R
, R/AllGenerics.R
postHocTest-class.Rd
The postHocTest Class, represents the result of post-hoc test result among multiple groups
# S4 method for postHocTest
show(object)
a postHocTest-class
object
a postHocTest
object.
result
a IRanges::DataFrameList
, each DataFrame
consists
of five variables:
comparisons
: character, specify which two groups to test (the group names
are separated by "_)
diff_mean
: numeric, difference in mean abundances
pvalue
: numeric, p values
ci_lower
and ci_upper
: numeric, lower and upper confidence interval of
difference in mean abundances
abundance
abundance of each feature in each group
conf_level
confidence level
method
method used for post-hoc test
method_str
method illustration