Reference data for global metabolic construction

Reference data for global metabolic construction

The reference metabolic pathway data contains KOs, substrates and products, as well as a constructed reference global network, which used for metabolic network reconstruction

Format

The format is: List of 7 KO, substrate, product, user, date, version, reference network

Details

Information this dataset is involved:

• KO, all KEGG orthlogy enties in KEGG metabolic pathways.
• substrate, substrate of enzymatic reactions in all KEGG metabolic pathways.
• product, product of enzymatic reactions in all KEGG metabolic pathways.
• user who download this data.
• date, the date this data is downloaded.
• version, R version used to obtained it.
• network, the global network which is reconstructed based on all the metabolites.

References

https://www.bioconductor.org/packages/release/bioc/html/mmnet.html